Molecular Visualization Tools

• Mol*
  • Intro Guide (v); Exploring Overall Shape and Local Environments (v);  Documentation (w); Cheat Sheet (d)
• UCSF Chimera
  • Basics (v); Menus (v); Selecting atoms, residues and chains (v); Structure analysis (v); Structure Comparisons (v); Cheat Sheet (d) 
• iCn3D
  • Tutorials - Part 1 (windows, menus, representations) (v) and Part 2 (interactions, alignment, embedding) (v)
• Jmol
  • Intro to Jmol scripting (w); Jmol/JSmol documentation (w) ; Jmol Mouse Commands (w); Cheat Sheet (d)
• Pymol
  • Intro to Pymol via Webinar (v); Practical Pymol for beginners (w)

d - document; v - video; w - web-page; p - paper; r - link to resource